Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm29499-201ENSMUST00000189151 486 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm3551-201ENSMUST00000190750 664 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm28329-201ENSMUST00000191208 689 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm29171-201ENSMUST00000191397 486 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm2875-201ENSMUST00000211333 360 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 AC098716.1-201ENSMUST00000213527 703 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Gm8325-201ENSMUST00000099086 453 ntBASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col16a1Q8BLX7 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm11801-201ENSMUST00000117807 746 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm44421-201ENSMUST00000205064 1221 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm45120-201ENSMUST00000208880 408 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm9630-201ENSMUST00000178304 885 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col16a1Q8BLX7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col16a1Q8BLX7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm3150-201ENSMUST00000166418 204 ntBASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm8531-201ENSMUST00000188319 893 ntBASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm38151-201ENSMUST00000195085 289 ntBASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col16a1Q8BLX7 Gm18198-201ENSMUST00000204986 1551 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms