Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Samm50Q8BGH2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.68□□□□□ -0.06
Samm50Q8BGH2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Samm50Q8BGH2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.68□□□□□ -0.06
Samm50Q8BGH2 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Mir1938-201ENSMUST00000158746 100 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Gm7029-201ENSMUST00000173226 450 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Gm27572-201ENSMUST00000183702 255 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.67□□□□□ -0.06
Samm50Q8BGH2 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Samm50Q8BGH2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm13392-201ENSMUST00000117708 150 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm11637-201ENSMUST00000120601 592 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm27514-201ENSMUST00000183692 110 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Samm50Q8BGH2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Gm5187-201ENSMUST00000117317 991 ntBASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Samm50Q8BGH2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms