Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh19Q80TF3 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm14130-201ENSMUST00000118417 987 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm44967-201ENSMUST00000207047 631 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh19Q80TF3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh19Q80TF3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms