Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm8723-201ENSMUST00000166076 820 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm8701-201ENSMUST00000169259 874 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm4775-201ENSMUST00000169588 402 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm23363-201ENSMUST00000175024 79 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm2445-201ENSMUST00000182798 989 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm45925-201ENSMUST00000218882 744 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
Rif1Q6PR54 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.58□□□□□ -0.72
Rif1Q6PR54 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rif1Q6PR54 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm8824-201ENSMUST00000182962 990 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm9135-201ENSMUST00000182963 990 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm13263-201ENSMUST00000121271 838 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Rprl1-201ENSMUST00000158050 327 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.57□□□□□ -0.72
Rif1Q6PR54 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rif1Q6PR54 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms