Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.65□□□□□ -0.38
Nudcd1Q6PIP5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm16570-201ENSMUST00000161951 436 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm2383-201ENSMUST00000181461 807 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Mir433-201ENSMUST00000093564 124 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Nudcd1Q6PIP5 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gm27046-201ENSMUST00000182160 463 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Gm8712-201ENSMUST00000221090 701 ntBASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd1Q6PIP5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd1Q6PIP5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms