Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.7□□□□□ -0.38
Casc4Q6P2L7 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.69□□□□□ -0.38
Casc4Q6P2L7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Casc4Q6P2L7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Mir1938-201ENSMUST00000158746 100 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm10608-202ENSMUST00000213924 676 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Casc4Q6P2L7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.67□□□□□ -0.38
Casc4Q6P2L7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Casc4Q6P2L7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms