Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm24231-201ENSMUST00000104315 133 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm18187-201ENSMUST00000196476 984 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm8227-201ENSMUST00000223306 571 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm12363-201ENSMUST00000122250 668 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt39Q6IFX4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms