Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Gm20414-201ENSMUST00000172918 646 ntBASIC14.79□□□□□ -0.04
Col11a2Q64739 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Gm45500-201ENSMUST00000211676 803 ntBASIC14.79□□□□□ -0.04
Col11a2Q64739 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col11a2Q64739 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Col11a2Q64739 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.78□□□□□ -0.04
Col11a2Q64739 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm7504-201ENSMUST00000201449 424 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm18514-201ENSMUST00000218980 436 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm8894-201ENSMUST00000074642 666 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm13351-201ENSMUST00000118087 414 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm12948-201ENSMUST00000119406 682 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col11a2Q64739 Gm43778-201ENSMUST00000199438 199 ntBASIC14.78□□□□□ -0.04
Col11a2Q64739 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col11a2Q64739 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Col11a2Q64739 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.77□□□□□ -0.04
Col11a2Q64739 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col11a2Q64739 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col11a2Q64739 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.77□□□□□ -0.04
Col11a2Q64739 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a2Q64739 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.77□□□□□ -0.05
Col11a2Q64739 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a2Q64739 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm15003-201ENSMUST00000118884 446 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm10169-201ENSMUST00000121822 348 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.77□□□□□ -0.05
Col11a2Q64739 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm26989-201ENSMUST00000182608 749 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm5298-201ENSMUST00000201122 892 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col11a2Q64739 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.77□□□□□ -0.05
Col11a2Q64739 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms