Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcd1Q61466 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Smarcd1Q61466 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 AA914427-201ENSMUST00000193194 1166 ntBASIC13.02□□□□□ -0.33
Smarcd1Q61466 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.02□□□□□ -0.33
Smarcd1Q61466 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcd1Q61466 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm15808-201ENSMUST00000119046 604 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm13665-201ENSMUST00000120830 528 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcd1Q61466 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.01□□□□□ -0.33
Smarcd1Q61466 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcd1Q61466 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcd1Q61466 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms