Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cln3Q61124 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cln3Q61124 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Cln3Q61124 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.69□□□□□ -0.22
Cln3Q61124 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm7722-201ENSMUST00000120646 741 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 Gm15782-201ENSMUST00000121073 445 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 Gm12208-201ENSMUST00000122004 163 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.69□□□□□ -0.22
Cln3Q61124 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm44551-201ENSMUST00000208804 171 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.69□□□□□ -0.22
Cln3Q61124 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cln3Q61124 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cln3Q61124 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.69□□□□□ -0.22
Cln3Q61124 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.69□□□□□ -0.22
Cln3Q61124 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cln3Q61124 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cln3Q61124 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.68□□□□□ -0.22
Cln3Q61124 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm4482-201ENSMUST00000200876 742 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm807-202ENSMUST00000224929 408 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.68□□□□□ -0.22
Cln3Q61124 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cln3Q61124 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Cln3Q61124 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cln3Q61124 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.67□□□□□ -0.22
Cln3Q61124 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.67□□□□□ -0.22
Cln3Q61124 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cln3Q61124 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cln3Q61124 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Gm11509-201ENSMUST00000117358 325 ntBASIC13.67□□□□□ -0.22
Cln3Q61124 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Gm13366-201ENSMUST00000122198 970 ntBASIC13.67□□□□□ -0.22
Cln3Q61124 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cln3Q61124 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cln3Q61124 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.67□□□□□ -0.22
Cln3Q61124 Gm3332-201ENSMUST00000189337 928 ntBASIC13.67□□□□□ -0.22
Cln3Q61124 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cln3Q61124 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms