Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfaip3Q60769 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm13875-201ENSMUST00000120162 282 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm15703-201ENSMUST00000120250 880 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm14726-201ENSMUST00000120623 896 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm27320-201ENSMUST00000184892 109 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm37201-201ENSMUST00000191845 523 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfaip3Q60769 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm11531-201ENSMUST00000117614 555 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm20482-202ENSMUST00000174729 825 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm27023-201ENSMUST00000182372 285 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm5950-201ENSMUST00000213337 772 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfaip3Q60769 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfaip3Q60769 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms