Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpbQ60649 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Gm38266-201ENSMUST00000194931 421 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Gm43118-201ENSMUST00000199149 775 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ClpbQ60649 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ClpbQ60649 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
ClpbQ60649 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpbQ60649 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.02□□□□□ -0.48
ClpbQ60649 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.02□□□□□ -0.48
ClpbQ60649 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClpbQ60649 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.02□□□□□ -0.49
ClpbQ60649 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.02□□□□□ -0.49
ClpbQ60649 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ClpbQ60649 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.02□□□□□ -0.49
ClpbQ60649 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.02□□□□□ -0.49
ClpbQ60649 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm22121-201ENSMUST00000175148 54 ntBASIC12.02□□□□□ -0.49
ClpbQ60649 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.02□□□□□ -0.49
ClpbQ60649 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.02□□□□□ -0.49
ClpbQ60649 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ClpbQ60649 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
ClpbQ60649 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.02□□□□□ -0.49
ClpbQ60649 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
ClpbQ60649 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.02□□□□□ -0.49
ClpbQ60649 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClpbQ60649 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClpbQ60649 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClpbQ60649 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Mir1247-201ENSMUST00000116706 82 ntBASIC12.01□□□□□ -0.49
ClpbQ60649 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms