Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 CT009713.10-202ENSMUST00000225734 696 ntBASIC15□□□□□ -0.01
Vps54Q5SPW0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Gm24136-201ENSMUST00000083374 165 ntBASIC15□□□□□ -0.01
Vps54Q5SPW0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15□□□□□ -0.01
Vps54Q5SPW0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps54Q5SPW0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.99□□□□□ -0.01
Vps54Q5SPW0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps54Q5SPW0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm27046-201ENSMUST00000182160 463 ntBASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm4857-201ENSMUST00000192718 785 ntBASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.98□□□□□ -0.01
Vps54Q5SPW0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps54Q5SPW0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Gm14109-201ENSMUST00000118814 309 ntBASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.97□□□□□ -0.01
Vps54Q5SPW0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.97□□□□□ -0.01
Vps54Q5SPW0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms