Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.2□□□□□ -0.3
Gm29609Q3UU56 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Gm16479-201ENSMUST00000121706 932 ntBASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm29609Q3UU56 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm15131-201ENSMUST00000119124 595 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm14208-201ENSMUST00000119645 678 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm15276-201ENSMUST00000145953 498 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm31256-201ENSMUST00000194705 506 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm6458-201ENSMUST00000211573 635 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm29609Q3UU56 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm7809-201ENSMUST00000153199 742 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm9211-201ENSMUST00000182882 975 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm37042-201ENSMUST00000193816 581 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm13097-201ENSMUST00000210722 397 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm30285-201ENSMUST00000214614 422 ntBASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm29609Q3UU56 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms