Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Gm27892-201ENSMUST00000185017 106 ntBASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.27□□□□□ -0.29
Trim43aQ3TL54 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim43aQ3TL54 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm15703-201ENSMUST00000120250 880 ntBASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm23363-201ENSMUST00000175024 79 ntBASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm5356-201ENSMUST00000093326 615 ntBASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43aQ3TL54 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm11618-201ENSMUST00000117946 267 ntBASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.25□□□□□ -0.29
Trim43aQ3TL54 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43aQ3TL54 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms