Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm11780-201ENSMUST00000136880 516 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm9630-201ENSMUST00000178304 885 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm27742-201ENSMUST00000184667 60 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm8227-201ENSMUST00000223306 571 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.24□□□□□ -0.77
Trim63Q38HM4 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trim63Q38HM4 Gm37593-201ENSMUST00000191669 3254 ntBASIC10.24□□□□□ -0.77
Trim63Q38HM4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Gm15372-201ENSMUST00000120729 834 ntBASIC10.23□□□□□ -0.77
Trim63Q38HM4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.23□□□□□ -0.77
Trim63Q38HM4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Trim63Q38HM4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms