Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm13369-201ENSMUST00000119442 987 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Gm12997-201ENSMUST00000120207 640 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Gm14381-201ENSMUST00000122105 414 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm25668-201ENSMUST00000157700 129 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm21769-201ENSMUST00000211922 111 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm18329-201ENSMUST00000215832 589 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 AC126043.1-201ENSMUST00000221304 1141 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 AC151902.1-201ENSMUST00000227800 375 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Atf4Q06507 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atf4Q06507 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.24□□□□□ -0.45
Atf4Q06507 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm13297-201ENSMUST00000120205 934 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.24□□□□□ -0.45
Atf4Q06507 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.24□□□□□ -0.45
Atf4Q06507 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm2383-201ENSMUST00000181461 807 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.24□□□□□ -0.45
Atf4Q06507 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm6621-201ENSMUST00000193251 772 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm38158-201ENSMUST00000194617 339 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm37845-201ENSMUST00000194977 355 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm17330-201ENSMUST00000221047 165 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Gm7046-201ENSMUST00000221351 977 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Atf4Q06507 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Atf4Q06507 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Gm26315-201ENSMUST00000083890 321 ntBASIC12.24□□□□□ -0.45
Atf4Q06507 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Atf4Q06507 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atf4Q06507 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms