Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lig3P97386 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Lig3P97386 Gm14028-201ENSMUST00000117434 479 ntBASIC13.72□□□□□ -0.21
Lig3P97386 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.72□□□□□ -0.21
Lig3P97386 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Gm5523-201ENSMUST00000180415 997 ntBASIC13.72□□□□□ -0.21
Lig3P97386 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.72□□□□□ -0.21
Lig3P97386 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.72□□□□□ -0.21
Lig3P97386 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.72□□□□□ -0.21
Lig3P97386 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.72□□□□□ -0.21
Lig3P97386 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Lig3P97386 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lig3P97386 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lig3P97386 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lig3P97386 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.72□□□□□ -0.21
Lig3P97386 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.71□□□□□ -0.21
Lig3P97386 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Lig3P97386 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Lig3P97386 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Lig3P97386 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Lig3P97386 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Lig3P97386 Gm14350-201ENSMUST00000116642 640 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Gm14726-201ENSMUST00000120623 896 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Gm12403-201ENSMUST00000121384 959 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.71□□□□□ -0.21
Lig3P97386 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.71□□□□□ -0.21
Lig3P97386 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.71□□□□□ -0.21
Lig3P97386 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.71□□□□□ -0.21
Lig3P97386 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lig3P97386 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lig3P97386 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Lig3P97386 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lig3P97386 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Lig3P97386 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lig3P97386 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.7□□□□□ -0.22
Lig3P97386 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.7□□□□□ -0.22
Lig3P97386 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.7□□□□□ -0.22
Lig3P97386 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lig3P97386 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.7□□□□□ -0.22
Lig3P97386 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.7□□□□□ -0.22
Lig3P97386 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms