Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl21aP84444 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.38□□□□□ -0.75
Ccl21aP84444 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.38□□□□□ -0.75
Ccl21aP84444 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl21aP84444 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Ccl21aP84444 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl21aP84444 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Ccl21aP84444 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Ccl21aP84444 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl21aP84444 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl21aP84444 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Ccl21aP84444 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm11949-201ENSMUST00000117640 372 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm28388-201ENSMUST00000186262 437 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm17877-201ENSMUST00000192578 814 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm42657-201ENSMUST00000201746 211 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm2875-201ENSMUST00000211333 360 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm25201-201ENSMUST00000083093 170 ntBASIC10.37□□□□□ -0.75
Ccl21aP84444 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl21aP84444 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Ccl21aP84444 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl21aP84444 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccl21aP84444 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl21aP84444 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm15352-201ENSMUST00000118696 270 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm14219-201ENSMUST00000120414 288 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm11980-201ENSMUST00000121445 986 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm8737-201ENSMUST00000122208 642 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm23045-201ENSMUST00000175041 96 ntBASIC10.36□□□□□ -0.75
Ccl21aP84444 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms