Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm2P58774 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Gm27390-201ENSMUST00000184516 176 ntBASIC14.4□□□□□ -0.1
Tpm2P58774 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm2P58774 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.4□□□□□ -0.1
Tpm2P58774 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.4□□□□□ -0.1
Tpm2P58774 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Tpm2P58774 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tpm2P58774 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tpm2P58774 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm2P58774 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Tpm2P58774 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tpm2P58774 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.39□□□□□ -0.11
Tpm2P58774 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Tpm2P58774 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Gm12151-201ENSMUST00000121374 290 ntBASIC14.39□□□□□ -0.11
Tpm2P58774 Gm14719-201ENSMUST00000121891 340 ntBASIC14.39□□□□□ -0.11
Tpm2P58774 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm2P58774 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.39□□□□□ -0.11
Tpm2P58774 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.39□□□□□ -0.11
Tpm2P58774 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpm2P58774 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.39□□□□□ -0.11
Tpm2P58774 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tpm2P58774 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.39□□□□□ -0.11
Tpm2P58774 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpm2P58774 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.38□□□□□ -0.11
Tpm2P58774 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.38□□□□□ -0.11
Tpm2P58774 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.38□□□□□ -0.11
Tpm2P58774 Gm19220-201ENSMUST00000222682 803 ntBASIC14.38□□□□□ -0.11
Tpm2P58774 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm2P58774 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.38□□□□□ -0.11
Tpm2P58774 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm2P58774 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tpm2P58774 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm2P58774 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Tpm2P58774 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Tpm2P58774 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.37□□□□□ -0.11
Tpm2P58774 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms