Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tpm1P58771 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Tpm1P58771 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.95□□□□□ -0.18
Tpm1P58771 Gm27390-201ENSMUST00000184516 176 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.95□□□□□ -0.18
Tpm1P58771 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.95□□□□□ -0.18
Tpm1P58771 Gm18307-201ENSMUST00000206864 949 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.95□□□□□ -0.18
Tpm1P58771 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tpm1P58771 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tpm1P58771 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm22189-201ENSMUST00000103822 86 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm12151-201ENSMUST00000121374 290 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tpm1P58771 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tpm1P58771 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Tpm1P58771 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.94□□□□□ -0.18
Tpm1P58771 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.93□□□□□ -0.18
Tpm1P58771 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tpm1P58771 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tpm1P58771 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms