Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.57□□□□□ -0.4
SmoP56726 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.57□□□□□ -0.4
SmoP56726 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.57□□□□□ -0.4
SmoP56726 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
SmoP56726 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.57□□□□□ -0.4
SmoP56726 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Gm44958-201ENSMUST00000203734 736 ntBASIC12.57□□□□□ -0.4
SmoP56726 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.57□□□□□ -0.4
SmoP56726 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.57□□□□□ -0.4
SmoP56726 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SmoP56726 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SmoP56726 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
SmoP56726 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SmoP56726 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SmoP56726 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.56□□□□□ -0.4
SmoP56726 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.56□□□□□ -0.4
SmoP56726 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SmoP56726 Gm12015-201ENSMUST00000117065 843 ntBASIC12.56□□□□□ -0.4
SmoP56726 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.56□□□□□ -0.4
SmoP56726 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.56□□□□□ -0.4
SmoP56726 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.56□□□□□ -0.4
SmoP56726 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.56□□□□□ -0.4
SmoP56726 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SmoP56726 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SmoP56726 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.56□□□□□ -0.4
SmoP56726 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
SmoP56726 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.56□□□□□ -0.4
SmoP56726 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.56□□□□□ -0.4
SmoP56726 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SmoP56726 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SmoP56726 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
SmoP56726 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.55□□□□□ -0.4
SmoP56726 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SmoP56726 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
SmoP56726 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm15236-201ENSMUST00000117309 379 ntBASIC12.55□□□□□ -0.4
SmoP56726 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.55□□□□□ -0.4
SmoP56726 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.55□□□□□ -0.4
SmoP56726 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.55□□□□□ -0.4
SmoP56726 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.55□□□□□ -0.4
SmoP56726 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm18056-201ENSMUST00000207670 568 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm18061-201ENSMUST00000208350 562 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm18063-201ENSMUST00000208529 568 ntBASIC12.55□□□□□ -0.4
SmoP56726 Gm18052-201ENSMUST00000208750 559 ntBASIC12.55□□□□□ -0.4
SmoP56726 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.55□□□□□ -0.4
SmoP56726 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SmoP56726 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SmoP56726 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms