Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lim2P56563 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lim2P56563 Gm14723-201ENSMUST00000118686 215 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.51□□□□□ -0.41
Lim2P56563 Gm11964-201ENSMUST00000120982 444 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.51□□□□□ -0.41
Lim2P56563 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.51□□□□□ -0.41
Lim2P56563 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.51□□□□□ -0.41
Lim2P56563 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lim2P56563 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lim2P56563 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Lim2P56563 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Gm15703-201ENSMUST00000120250 880 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Gm13342-201ENSMUST00000121055 207 ntBASIC12.5□□□□□ -0.41
Lim2P56563 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Gm2991-201ENSMUST00000173338 480 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Gm8018-201ENSMUST00000173536 789 ntBASIC12.5□□□□□ -0.41
Lim2P56563 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm6621-201ENSMUST00000193251 772 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm43822-201ENSMUST00000200285 476 ntBASIC12.5□□□□□ -0.41
Lim2P56563 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Cts7-204ENSMUST00000225321 1257 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lim2P56563 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lim2P56563 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.5□□□□□ -0.41
Lim2P56563 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lim2P56563 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lim2P56563 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lim2P56563 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lim2P56563 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lim2P56563 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lim2P56563 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lim2P56563 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lim2P56563 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lim2P56563 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.49□□□□□ -0.41
Lim2P56563 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms