Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Msh6P54276 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.77■□□□□ 0.11
Msh6P54276 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Msh6P54276 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Msh6P54276 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Msh6P54276 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Msh6P54276 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.76■□□□□ 0.11
Msh6P54276 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.76■□□□□ 0.11
Msh6P54276 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.76■□□□□ 0.11
Msh6P54276 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Msh6P54276 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Gm7593-201ENSMUST00000187246 644 ntBASIC15.76■□□□□ 0.11
Msh6P54276 Gm9540-201ENSMUST00000188230 478 ntBASIC15.76■□□□□ 0.11
Msh6P54276 Gm43058-201ENSMUST00000197645 625 ntBASIC15.76■□□□□ 0.11
Msh6P54276 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Msh6P54276 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.76■□□□□ 0.11
Msh6P54276 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Msh6P54276 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Msh6P54276 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Msh6P54276 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Msh6P54276 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Msh6P54276 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Msh6P54276 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.75■□□□□ 0.11
Msh6P54276 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.75■□□□□ 0.11
Msh6P54276 Gm8194-201ENSMUST00000159783 859 ntBASIC15.75■□□□□ 0.11
Msh6P54276 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh6P54276 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.75■□□□□ 0.11
Msh6P54276 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.75■□□□□ 0.11
Msh6P54276 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.75■□□□□ 0.11
Msh6P54276 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh6P54276 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh6P54276 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.75■□□□□ 0.11
Msh6P54276 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.75■□□□□ 0.11
Msh6P54276 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Msh6P54276 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.75■□□□□ 0.11
Msh6P54276 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Msh6P54276 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.75■□□□□ 0.11
Msh6P54276 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.75■□□□□ 0.11
Msh6P54276 Gm4482-201ENSMUST00000200876 742 ntBASIC15.75■□□□□ 0.11
Msh6P54276 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Msh6P54276 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Msh6P54276 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Msh6P54276 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Msh6P54276 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Msh6P54276 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms