Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm26448-201ENSMUST00000082446 203 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lbx1P52955 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lbx1P52955 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.13□□□□□ -0.47
Lbx1P52955 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Lbx1P52955 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Gm29304-201ENSMUST00000186555 695 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Gm29223-201ENSMUST00000188867 695 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Gm37921-201ENSMUST00000194333 695 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Gm42433-201ENSMUST00000196806 940 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.13□□□□□ -0.47
Lbx1P52955 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.13□□□□□ -0.47
Lbx1P52955 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lbx1P52955 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lbx1P52955 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lbx1P52955 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm11578-201ENSMUST00000118530 459 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Gm8737-201ENSMUST00000122208 642 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm8723-201ENSMUST00000166076 820 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm8701-201ENSMUST00000169259 874 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm23045-201ENSMUST00000175041 96 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.12□□□□□ -0.47
Lbx1P52955 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm43962-201ENSMUST00000203898 190 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lbx1P52955 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.12□□□□□ -0.47
Lbx1P52955 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.12□□□□□ -0.47
Lbx1P52955 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lbx1P52955 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms