Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Cdx2P43241 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm11628-201ENSMUST00000117568 171 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdx2P43241 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Cdx2P43241 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm5733-201ENSMUST00000190232 939 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Gm4482-201ENSMUST00000200876 742 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdx2P43241 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdx2P43241 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdx2P43241 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.86□□□□□ -0.51
Cdx2P43241 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cdx2P43241 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdx2P43241 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdx2P43241 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Gm17391-201ENSMUST00000171036 126 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 Gm43916-201ENSMUST00000205062 967 ntBASIC11.85□□□□□ -0.51
Cdx2P43241 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdx2P43241 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdx2P43241 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Gm5455-201ENSMUST00000058710 715 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms