Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.06□□□□□ -0.8
Cd27P41272 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm12058-201ENSMUST00000118614 437 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm23119-201ENSMUST00000158610 140 ntBASIC10.05□□□□□ -0.8
Cd27P41272 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Cd27P41272 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm18304-201ENSMUST00000189162 546 ntBASIC10.05□□□□□ -0.8
Cd27P41272 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm42937-201ENSMUST00000197360 752 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.05□□□□□ -0.8
Cd27P41272 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Gm18935-201ENSMUST00000212692 664 ntBASIC10.05□□□□□ -0.8
Cd27P41272 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.05□□□□□ -0.8
Cd27P41272 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.05□□□□□ -0.8
Cd27P41272 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Cd27P41272 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Cd27P41272 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.05□□□□□ -0.8
Cd27P41272 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cd27P41272 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd27P41272 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.04□□□□□ -0.8
Cd27P41272 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd27P41272 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cd27P41272 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cd27P41272 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.04□□□□□ -0.8
Cd27P41272 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 Gm25043-201ENSMUST00000158604 212 ntBASIC10.04□□□□□ -0.8
Cd27P41272 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.04□□□□□ -0.8
Cd27P41272 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.04□□□□□ -0.8
Cd27P41272 Gm6621-201ENSMUST00000193251 772 ntBASIC10.04□□□□□ -0.8
Cd27P41272 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cd27P41272 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.04□□□□□ -0.8
Cd27P41272 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.04□□□□□ -0.8
Cd27P41272 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms