Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm45331-201ENSMUST00000209868 554 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdh4P39038 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Gm15370-201ENSMUST00000117158 253 ntBASIC12□□□□□ -0.49
Cdh4P39038 Gm12241-201ENSMUST00000118330 726 ntBASIC12□□□□□ -0.49
Cdh4P39038 Gm4986-201ENSMUST00000119731 549 ntBASIC12□□□□□ -0.49
Cdh4P39038 Gm13297-201ENSMUST00000120205 934 ntBASIC12□□□□□ -0.49
Cdh4P39038 Gm11964-201ENSMUST00000120982 444 ntBASIC12□□□□□ -0.49
Cdh4P39038 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Cdh4P39038 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12□□□□□ -0.49
Cdh4P39038 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Gm8018-201ENSMUST00000173536 789 ntBASIC12□□□□□ -0.49
Cdh4P39038 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cdh4P39038 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cdh4P39038 Gm9368-201ENSMUST00000219348 831 ntBASIC12□□□□□ -0.49
Cdh4P39038 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12□□□□□ -0.49
Cdh4P39038 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdh4P39038 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12□□□□□ -0.49
Cdh4P39038 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12□□□□□ -0.49
Cdh4P39038 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cdh4P39038 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Cdh4P39038 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Cdh4P39038 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh4P39038 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Gm15703-201ENSMUST00000120250 880 ntBASIC11.99□□□□□ -0.49
Cdh4P39038 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Gm38266-201ENSMUST00000194931 421 ntBASIC11.99□□□□□ -0.49
Cdh4P39038 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdh4P39038 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdh4P39038 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh4P39038 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdh4P39038 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh4P39038 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh4P39038 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms