Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HmgclP38060 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HmgclP38060 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HmgclP38060 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
HmgclP38060 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HmgclP38060 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
HmgclP38060 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.33□□□□□ -0.44
HmgclP38060 Gm13786-201ENSMUST00000122371 333 ntBASIC12.33□□□□□ -0.44
HmgclP38060 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
HmgclP38060 Gm17420-201ENSMUST00000164753 153 ntBASIC12.33□□□□□ -0.44
HmgclP38060 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HmgclP38060 Gm27023-201ENSMUST00000182372 285 ntBASIC12.33□□□□□ -0.44
HmgclP38060 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.33□□□□□ -0.44
HmgclP38060 Gm39404-201ENSMUST00000216350 313 ntBASIC12.33□□□□□ -0.44
HmgclP38060 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.33□□□□□ -0.44
HmgclP38060 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.33□□□□□ -0.44
HmgclP38060 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HmgclP38060 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.33□□□□□ -0.44
HmgclP38060 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
HmgclP38060 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HmgclP38060 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HmgclP38060 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
HmgclP38060 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Gm13392-201ENSMUST00000117708 150 ntBASIC12.32□□□□□ -0.44
HmgclP38060 Gm13875-201ENSMUST00000120162 282 ntBASIC12.32□□□□□ -0.44
HmgclP38060 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Gm37201-201ENSMUST00000191845 523 ntBASIC12.32□□□□□ -0.44
HmgclP38060 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.32□□□□□ -0.44
HmgclP38060 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.32□□□□□ -0.44
HmgclP38060 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Gm10478-201ENSMUST00000084451 396 ntBASIC12.32□□□□□ -0.44
HmgclP38060 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
HmgclP38060 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HmgclP38060 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HmgclP38060 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.31□□□□□ -0.44
HmgclP38060 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HmgclP38060 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HmgclP38060 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HmgclP38060 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HmgclP38060 Gm9083-201ENSMUST00000120423 819 ntBASIC12.31□□□□□ -0.44
HmgclP38060 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HmgclP38060 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HmgclP38060 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms