Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.67□□□□□ -0.38
VimP20152 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VimP20152 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.67□□□□□ -0.38
VimP20152 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
VimP20152 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.67□□□□□ -0.38
VimP20152 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.67□□□□□ -0.38
VimP20152 Mir6990-201ENSMUST00000183724 91 ntBASIC12.67□□□□□ -0.38
VimP20152 Gm27533-201ENSMUST00000183800 152 ntBASIC12.67□□□□□ -0.38
VimP20152 Gm17795-201ENSMUST00000214505 757 ntBASIC12.67□□□□□ -0.38
VimP20152 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.67□□□□□ -0.38
VimP20152 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.67□□□□□ -0.38
VimP20152 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VimP20152 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VimP20152 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.67□□□□□ -0.38
VimP20152 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VimP20152 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VimP20152 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VimP20152 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.66□□□□□ -0.38
VimP20152 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
VimP20152 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VimP20152 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.66□□□□□ -0.38
VimP20152 Gm18733-201ENSMUST00000173950 856 ntBASIC12.66□□□□□ -0.38
VimP20152 Gm24158-201ENSMUST00000175263 71 ntBASIC12.66□□□□□ -0.38
VimP20152 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.66□□□□□ -0.38
VimP20152 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.66□□□□□ -0.38
VimP20152 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.66□□□□□ -0.38
VimP20152 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.66□□□□□ -0.38
VimP20152 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
VimP20152 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VimP20152 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VimP20152 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VimP20152 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VimP20152 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.65□□□□□ -0.38
VimP20152 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.65□□□□□ -0.38
VimP20152 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
VimP20152 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
VimP20152 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.65□□□□□ -0.38
VimP20152 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.65□□□□□ -0.38
VimP20152 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.65□□□□□ -0.38
VimP20152 Mir1895-201ENSMUST00000122615 79 ntBASIC12.65□□□□□ -0.38
VimP20152 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.65□□□□□ -0.38
VimP20152 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms