Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp6P0C0A3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp6P0C0A3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.63□□□□□ -0.23
Chmp6P0C0A3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp6P0C0A3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp6P0C0A3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms