Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P06344 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
P06344 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.17□□□□□ -0.62
P06344 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.16□□□□□ -0.62
P06344 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.16□□□□□ -0.62
P06344 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.16□□□□□ -0.62
P06344 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.16□□□□□ -0.62
P06344 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P06344 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Gm20482-202ENSMUST00000174729 825 ntBASIC11.16□□□□□ -0.62
P06344 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.16□□□□□ -0.62
P06344 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Gm44124-201ENSMUST00000204159 472 ntBASIC11.16□□□□□ -0.62
P06344 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.16□□□□□ -0.62
P06344 Gm5950-201ENSMUST00000213337 772 ntBASIC11.16□□□□□ -0.62
P06344 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.16□□□□□ -0.62
P06344 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.16□□□□□ -0.62
P06344 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.16□□□□□ -0.62
P06344 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
P06344 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.16□□□□□ -0.62
P06344 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.16□□□□□ -0.62
P06344 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
P06344 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
P06344 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06344 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
P06344 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.15□□□□□ -0.62
P06344 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P06344 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gm22323-201ENSMUST00000103832 109 ntBASIC11.15□□□□□ -0.62
P06344 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.15□□□□□ -0.62
P06344 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.15□□□□□ -0.62
P06344 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
P06344 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.15□□□□□ -0.62
P06344 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.15□□□□□ -0.62
P06344 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gm27243-201ENSMUST00000183964 521 ntBASIC11.15□□□□□ -0.62
P06344 Gm27320-201ENSMUST00000184892 109 ntBASIC11.15□□□□□ -0.62
P06344 Gm37201-201ENSMUST00000191845 523 ntBASIC11.15□□□□□ -0.62
P06344 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms