Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
PdgfrbP05622 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm14127-201ENSMUST00000117906 678 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm14760-201ENSMUST00000121831 999 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm13366-201ENSMUST00000122198 970 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.68□□□□□ -0.38
PdgfrbP05622 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdgfrbP05622 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdgfrbP05622 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm24231-201ENSMUST00000104315 133 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Mir7085-201ENSMUST00000184353 66 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm5781-201ENSMUST00000219792 443 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.67□□□□□ -0.38
PdgfrbP05622 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdgfrbP05622 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PdgfrbP05622 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
PdgfrbP05622 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.66□□□□□ -0.38
PdgfrbP05622 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.66□□□□□ -0.38
PdgfrbP05622 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdgfrbP05622 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PdgfrbP05622 Gm5187-201ENSMUST00000117317 991 ntBASIC12.66□□□□□ -0.38
PdgfrbP05622 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.66□□□□□ -0.38
PdgfrbP05622 Gm11597-201ENSMUST00000121423 964 ntBASIC12.66□□□□□ -0.38
PdgfrbP05622 Rmrp-201ENSMUST00000157463 271 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms