Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gm13316-201ENSMUST00000140537 691 ntBASIC10.8□□□□□ -0.68
Igh-VJ558P01758 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igh-VJ558P01758 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Snora78-201ENSMUST00000158630 128 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm37008-201ENSMUST00000195712 319 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm42599-201ENSMUST00000201308 469 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm44958-201ENSMUST00000203734 736 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Gm10076-201ENSMUST00000073238 384 ntBASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Igh-VJ558P01758 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms