Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.56□□□□□ -0.56
Cops4O88544 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.56□□□□□ -0.56
Cops4O88544 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cops4O88544 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.55□□□□□ -0.56
Cops4O88544 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cops4O88544 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.55□□□□□ -0.56
Cops4O88544 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Cops4O88544 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Gm18307-201ENSMUST00000206864 949 ntBASIC11.55□□□□□ -0.56
Cops4O88544 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Cops4O88544 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.55□□□□□ -0.56
Cops4O88544 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cops4O88544 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cops4O88544 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cops4O88544 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Cops4O88544 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Gm12341-201ENSMUST00000119724 503 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Gm28631-201ENSMUST00000190740 334 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.54□□□□□ -0.56
Cops4O88544 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Cops4O88544 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms