Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.53□□□□□ -0.72
Pfdn2O70591 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gm27321-201ENSMUST00000185021 205 ntBASIC10.53□□□□□ -0.72
Pfdn2O70591 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.53□□□□□ -0.72
Pfdn2O70591 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.53□□□□□ -0.72
Pfdn2O70591 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.53□□□□□ -0.72
Pfdn2O70591 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pfdn2O70591 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pfdn2O70591 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.52□□□□□ -0.72
Pfdn2O70591 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Daam2-202ENSMUST00000224595 1926 ntBASIC10.52□□□□□ -0.72
Pfdn2O70591 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Pfdn2O70591 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn2O70591 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.52□□□□□ -0.73
Pfdn2O70591 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm17330-201ENSMUST00000221047 165 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.52□□□□□ -0.73
Pfdn2O70591 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Pfdn2O70591 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn2O70591 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn2O70591 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.51□□□□□ -0.73
Pfdn2O70591 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.51□□□□□ -0.73
Pfdn2O70591 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn2O70591 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.51□□□□□ -0.73
Pfdn2O70591 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn2O70591 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.51□□□□□ -0.73
Pfdn2O70591 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn2O70591 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn2O70591 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms