Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Rnf13O54965 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm12928-201ENSMUST00000117115 573 ntBASIC11.33□□□□□ -0.6
Rnf13O54965 Gm8805-201ENSMUST00000117848 313 ntBASIC11.33□□□□□ -0.6
Rnf13O54965 Gm11618-201ENSMUST00000117946 267 ntBASIC11.33□□□□□ -0.6
Rnf13O54965 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Mir6977-201ENSMUST00000184960 64 ntBASIC11.33□□□□□ -0.6
Rnf13O54965 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Rnf13O54965 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf13O54965 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm15823-201ENSMUST00000064305 670 ntBASIC11.33□□□□□ -0.6
Rnf13O54965 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf13O54965 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf13O54965 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Rnf13O54965 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rnf13O54965 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rnf13O54965 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.32□□□□□ -0.6
Rnf13O54965 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Gm7488-201ENSMUST00000117148 684 ntBASIC11.32□□□□□ -0.6
Rnf13O54965 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rnf13O54965 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rnf13O54965 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf13O54965 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Gm8227-201ENSMUST00000223306 571 ntBASIC11.32□□□□□ -0.6
Rnf13O54965 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.32□□□□□ -0.6
Rnf13O54965 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf13O54965 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf13O54965 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf13O54965 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf13O54965 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms