Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.93□□□□□ -0.18
B020004C17RikJ3QP07 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Gm8956-201ENSMUST00000203939 825 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
B020004C17RikJ3QP07 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm23912-201ENSMUST00000104687 87 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm11663-201ENSMUST00000117888 290 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm15573-201ENSMUST00000119487 540 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm14585-201ENSMUST00000120713 634 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm7666-201ENSMUST00000146631 819 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm5705-201ENSMUST00000066241 711 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm26035-201ENSMUST00000083065 308 ntBASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
B020004C17RikJ3QP07 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms