Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NpcdF8VQB8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.07■□□□□ 0
NpcdF8VQB8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NpcdF8VQB8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
NpcdF8VQB8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.06■□□□□ 0
NpcdF8VQB8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.06■□□□□ 0
NpcdF8VQB8 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Gm22442-201ENSMUST00000157256 144 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Gm25881-201ENSMUST00000157783 103 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Gm37246-201ENSMUST00000192665 835 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
NpcdF8VQB8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Gm9132-201ENSMUST00000210182 832 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.06■□□□□ 0
NpcdF8VQB8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.06■□□□□ 0
NpcdF8VQB8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NpcdF8VQB8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.06■□□□□ 0
NpcdF8VQB8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
NpcdF8VQB8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.05■□□□□ 0
NpcdF8VQB8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NpcdF8VQB8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NpcdF8VQB8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Gm22133-201ENSMUST00000102082 109 ntBASIC15.05■□□□□ -0
NpcdF8VQB8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Gm12196-201ENSMUST00000120954 262 ntBASIC15.05■□□□□ -0
NpcdF8VQB8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.05■□□□□ -0
NpcdF8VQB8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.05■□□□□ -0
NpcdF8VQB8 Gm23085-201ENSMUST00000157849 293 ntBASIC15.05■□□□□ -0
NpcdF8VQB8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.05■□□□□ -0
NpcdF8VQB8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.05■□□□□ -0
NpcdF8VQB8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.05■□□□□ -0
NpcdF8VQB8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NpcdF8VQB8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
NpcdF8VQB8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.04■□□□□ -0
NpcdF8VQB8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.04■□□□□ -0
NpcdF8VQB8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms