Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm17889-201ENSMUST00000198410 598 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm5298-201ENSMUST00000201122 892 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm42657-201ENSMUST00000201746 211 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.76□□□□□ -0.53
Colca2F8VPY8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.76□□□□□ -0.53
Colca2F8VPY8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Colca2F8VPY8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm13600-201ENSMUST00000117949 744 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm13937-201ENSMUST00000121000 988 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm17877-201ENSMUST00000192578 814 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm5714-201ENSMUST00000197343 566 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm19009-201ENSMUST00000223072 823 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Colca2F8VPY8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.74□□□□□ -0.53
Colca2F8VPY8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Gm26013-201ENSMUST00000104404 119 ntBASIC11.74□□□□□ -0.53
Colca2F8VPY8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.74□□□□□ -0.53
Colca2F8VPY8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Colca2F8VPY8 Gm3551-201ENSMUST00000190750 664 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms