Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.98□□□□□ -0.01
Ube4aE9Q735 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Ube4aE9Q735 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.98□□□□□ -0.01
Ube4aE9Q735 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube4aE9Q735 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gm13611-201ENSMUST00000118269 318 ntBASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gm24514-201ENSMUST00000174961 285 ntBASIC14.97□□□□□ -0.01
Ube4aE9Q735 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.97□□□□□ -0.01
Ube4aE9Q735 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.97□□□□□ -0.01
Ube4aE9Q735 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.97□□□□□ -0.01
Ube4aE9Q735 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube4aE9Q735 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm13035-201ENSMUST00000117496 342 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ube4aE9Q735 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm18711-201ENSMUST00000199341 750 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm9555-201ENSMUST00000200908 583 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ube4aE9Q735 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gm21811-201ENSMUST00000096485 930 ntBASIC14.96□□□□□ -0.01
Ube4aE9Q735 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ube4aE9Q735 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ube4aE9Q735 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.96□□□□□ -0.02
Ube4aE9Q735 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 328.8 ms