Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm6963-201ENSMUST00000147879 379 ntBASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb9E9Q5G2 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm24934-201ENSMUST00000103764 111 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm19994-201ENSMUST00000217086 586 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Gm9996-201ENSMUST00000070359 913 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb9E9Q5G2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gzmn-202ENSMUST00000225535 989 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms