Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn2B2RVW2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm12501-201ENSMUST00000119163 529 ntBASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm25881-201ENSMUST00000157783 103 ntBASIC14.45□□□□□ -0.1
Clrn2B2RVW2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.45□□□□□ -0.1
Clrn2B2RVW2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn2B2RVW2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm11667-201ENSMUST00000119828 486 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm14665-201ENSMUST00000122294 557 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm27530-201ENSMUST00000184096 98 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn2B2RVW2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.43□□□□□ -0.1
Clrn2B2RVW2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Clrn2B2RVW2 Gm8566-201ENSMUST00000120174 465 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms