Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm8018-201ENSMUST00000173536 789 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm25927-201ENSMUST00000175058 117 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm3890-201ENSMUST00000182416 207 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm18584-201ENSMUST00000203098 964 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb1A2AQ07 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Gm7063-201ENSMUST00000186840 981 ntBASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.79□□□□□ -0.36
Tubb1A2AQ07 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb1A2AQ07 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm23119-201ENSMUST00000158610 140 ntBASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm18304-201ENSMUST00000189162 546 ntBASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm8227-201ENSMUST00000223306 571 ntBASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms