Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm38037-201ENSMUST00000192600 1624 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm6912-201ENSMUST00000117218 544 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm14494-201ENSMUST00000118786 435 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm18766-201ENSMUST00000189811 808 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm13332-201ENSMUST00000120451 1398 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 AC168058.1-201ENSMUST00000219521 2282 ntBASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Gm16476-201ENSMUST00000221544 139 ntBASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav8-1A0A075B641 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms