Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Gm27390-201ENSMUST00000184516 176 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
Crlf3Q9Z2L7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm13689-201ENSMUST00000119360 685 ntBASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm12291-201ENSMUST00000121627 311 ntBASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Crlf3Q9Z2L7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crlf3Q9Z2L7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms