Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Mir1982-201ENSMUST00000157368 74 ntBASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ClcnkaQ9WUB7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.57□□□□□ -0.56
ClcnkaQ9WUB7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms