Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm11803-201ENSMUST00000119966 444 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm22331-201ENSMUST00000158066 136 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm17150-201ENSMUST00000165577 381 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm8810-201ENSMUST00000172895 754 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm8602-201ENSMUST00000184045 607 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm43433-201ENSMUST00000196573 481 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm8598-201ENSMUST00000221184 836 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RpgrQ9R0X5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Gm37497-201ENSMUST00000195830 798 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RpgrQ9R0X5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Gm12203-201ENSMUST00000118235 598 ntBASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Gm12209-201ENSMUST00000120089 596 ntBASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RpgrQ9R0X5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms