Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.02□□□□□ -0.16
AmfrQ9R049 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
AmfrQ9R049 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.02□□□□□ -0.16
AmfrQ9R049 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AmfrQ9R049 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.02□□□□□ -0.17
AmfrQ9R049 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.02□□□□□ -0.17
AmfrQ9R049 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.02□□□□□ -0.17
AmfrQ9R049 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
AmfrQ9R049 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AmfrQ9R049 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
AmfrQ9R049 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.01□□□□□ -0.17
AmfrQ9R049 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.01□□□□□ -0.17
AmfrQ9R049 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm17208-201ENSMUST00000168388 535 ntBASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.01□□□□□ -0.17
AmfrQ9R049 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
AmfrQ9R049 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.01□□□□□ -0.17
AmfrQ9R049 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AmfrQ9R049 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AmfrQ9R049 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14□□□□□ -0.17
AmfrQ9R049 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AmfrQ9R049 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
AmfrQ9R049 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14□□□□□ -0.17
AmfrQ9R049 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14□□□□□ -0.17
AmfrQ9R049 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14□□□□□ -0.17
AmfrQ9R049 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms