Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Gm24845-201ENSMUST00000158034 109 ntBASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf3Q9QXK7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm14832-201ENSMUST00000121289 322 ntBASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm20482-202ENSMUST00000174729 825 ntBASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm8712-201ENSMUST00000221090 701 ntBASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf3Q9QXK7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf3Q9QXK7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm23119-201ENSMUST00000158610 140 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm27320-201ENSMUST00000184892 109 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm28882-201ENSMUST00000185504 314 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm42937-201ENSMUST00000197360 752 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Gm24136-201ENSMUST00000083374 165 ntBASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf3Q9QXK7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms